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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Cotton-Graimondii_physical
(Reference Set)
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Correspondences
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Maps Gr_Chr03
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Cotton
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
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Correspondences
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Sanity Check:		 No Yes
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Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Cotton - Graimondii_physical [ View Map Set Info ]
Map Name: Gr_Chr03
Map Start: 0 bp
Map Stop: 45,751,596 bp
Features by Type:
202 Marker Cotton
202 Total

Map Features

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Items 1 to 25 of 202.       of 9 | Next
Cotton - Graimondii_physical - Gr_Chr03
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
A1146 Marker Cotton 4,807,973 - 4,808,795 Cotton - PK - c2 A1146 Marker 91.5 (cM) Automated name-based View Maps
A1171 Marker Cotton 29,931,543 - 29,932,734 Cotton - PK - c3 A1171 Marker 71.7 (cM) Automated name-based View Maps
A1338 Marker Cotton 34,723,959 - 34,725,138 Cotton - PK - c17 A1338 Marker 49.9 (cM) Automated name-based View Maps
A1436 Marker Cotton 2,422,175 - 2,423,136 Cotton - PK - c17 A1436 Marker 74.1 (cM) Automated name-based View Maps
Cotton - PK - c2 A1436 Marker 111.9 (cM) Automated name-based View Maps
A1683 Marker Cotton 35,433,774 - 35,434,030 Cotton - PK - c17 A1683 Marker 51.7 (cM) Automated name-based View Maps
A1748 Marker Cotton 43,062,418 - 43,063,566 Cotton - PK - c3 A1748 Marker 23.4 (cM) Automated name-based View Maps
A1824 Marker Cotton 12,672,762 - 12,674,103 Cotton - PK - c17 A1824 Marker 57 (cM) Automated name-based View Maps
A1834 Marker Cotton 35,480,603 - 35,480,816 Cotton - PK - c17 A1834 Marker 49 (cM) Automated name-based View Maps
BNL2443 Marker Cotton 36,198,720 - 36,199,283 Cotton - GVc - 3 BNL2443 Marker 24.8 (cM) Automated name-based View Maps
Cotton - TH - 3 BNL2443 Marker 31.7 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL2443 Marker 73.3 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL2443 Marker 92.59 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL2443b Marker 16.49 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 BNL2443a Marker 20.66 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL2443 Marker 50.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL2443 Marker 25.4 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL2443 Marker 26.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL2443 Marker 35.9 (cM) Automated name-based View Maps
Cotton - GVc - 17 BNL2443 Marker 18 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL2443c Marker 14.55 (cM) Automated name-based View Maps
Cotton - CH - 14 BNL2443 Marker 61.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 BNL2443 Marker 23 (cM) Automated name-based View Maps
BNL2895 Marker Cotton 13,582,568 - 13,583,061 Cotton - TH - 21 BNL2895 Marker 73.4 (cM) Automated name-based View Maps
Cotton - GVc - 21 BNL2895 Marker 73.1 (cM) Automated name-based View Maps
Cotton - T3 - 21 BNL2895 Marker 91.36 (cM) Automated name-based View Maps
Cotton - GVc - 11 BNL2895 Marker 79.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - D02 BNL2895 Marker 109.5 (cM) Automated name-based View Maps
Cotton - TH - 11 BNL2895 Marker 74.3 (cM) Automated name-based View Maps
Cotton - CH - 21 BNL2895 Marker 123.8 (cM) Automated name-based View Maps
Cotton - T3 - 11 BNL2895 Marker 104.35 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - A03 BNL2895 Marker 92.6 (cM) Automated name-based View Maps
Cotton - E3 - 21 BNL2895 Marker 95.2 (cM) Automated name-based View Maps
BNL2967 Marker Cotton 10,465,052 - 10,465,574 Cotton - GVc - 12 BNL2967 Marker 102.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c12 BNL2967 Marker 142.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c12 BNL2967 Marker 55.73 (cM) Automated name-based View Maps
Cotton - E3 - 12 BNL2967 Marker 61.5 (cM) Automated name-based View Maps
BNL3371 Marker Cotton 36,732,141 - 36,732,647 Cotton - T3 - 17 BNL3371 Marker 37.91 (cM) Automated name-based View Maps
Cotton - E3 - 17 BNL3371 Marker 53.3 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL3371 Marker 57.6 (cM) Automated name-based View Maps
BNL3408 Marker Cotton 42,143,440 - 42,143,677 Cotton - E3 - 17 BNL3408 Marker 43.5 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3408 Marker 94.68 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c3 BNL3408b Marker 0 (cM) Automated name-based View Maps
Cotton - PK - c17 BNL3408 Marker 55.3 (cM) Automated name-based View Maps
Cotton - GVc - 17 BNL3408 Marker 4.2 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-RIL - c17 BNL3408a Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL3408 Marker 6.4 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3408 Marker 0.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c3 BNL3408 Marker 0 (cM) Automated name-based View Maps
Cotton - E3 - 3 BNL3408 Marker 56 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL3408 Marker 14.26 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 BNL3408 Marker 4 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3408 Marker 27.7 (cM) Automated name-based View Maps
BNL3424 Marker Cotton 338,550 - 338,875 Cotton - T3 - 2 BNL3424 Marker 0 (cM) Automated name-based View Maps
Cotton - TH - 2 BNL3424 Marker 112.1 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3424 Marker 166.7 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL3424 Marker 0 (cM) Automated name-based View Maps
BNL3441 Marker Cotton 31,875,965 - 31,876,681 Cotton - E3 - 3 BNL3441 Marker 83.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c3 BNL3441 Marker 39.7 (cM) Automated name-based View Maps
Cotton - T3 - 3 BNL3441 Marker 68.58 (cM) Automated name-based View Maps
Cotton - CH - 3 BNL3441 Marker 19 (cM) Automated name-based View Maps
Cotton - GVc - 3 BNL3441 Marker 35.7 (cM) Automated name-based View Maps
Cotton - TH - 3 BNL3441 Marker 23.3 (cM) Automated name-based View Maps
BNL3590 Marker Cotton 18,634,806 - 18,635,181 Cotton - TH - 2 BNL3590 Marker 50.7 (cM) Automated name-based View Maps
Cotton - E3 - 2 BNL3590 Marker 76.8 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL3590 Marker 45.4 (cM) Automated name-based View Maps
Cotton - T3 - 2 BNL3590 Marker 60.68 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL3590 Marker 43.39 (cM) Automated name-based View Maps
Cotton - CH - 2 BNL3590 Marker 45.3 (cM) Automated name-based View Maps
Cotton - TH - 17 BNL3590 Marker 79.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c2 BNL3590 Marker 57.4 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c2 BNL3590 Marker 27.8 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC2 - c17 BNL3590 Marker 79 (cM) Automated name-based View Maps
Cotton - GVc - 2 BNL3590 Marker 36.3 (cM) Automated name-based View Maps
Cotton - CH - 17 BNL3590 Marker 72.6 (cM) Automated name-based View Maps
BNL4016 Marker Cotton 26,726,712 - 26,727,191 Cotton - E3 - 10 BNL4016 Marker 114.3 (cM) Automated name-based View Maps
BNL4073 Marker Cotton 34,512,285 - 34,512,694 Cotton - E3 - 17 BNL4073 Marker 76.5 (cM) Automated name-based View Maps
Cotton - T3 - 17 BNL4073 Marker 40.63 (cM) Automated name-based View Maps
CIR038 Marker Cotton 21,801,845 - 21,802,011 Cotton - E3 - 17 CIR038 Marker 81.7 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CIR038 Marker 44.3 (cM) Automated name-based View Maps
Cotton - CH - 17 CIR038 Marker 76.9 (cM) Automated name-based View Maps
Cotton - GVc - 17 CIR038 Marker 30.2 (cM) Automated name-based View Maps
CIR251 Marker Cotton 4,839,347 - 4,839,545 Cotton - Guazuncho2xVH8-RIL - c17 CIR251 Marker 38.57 (cM) Automated name-based View Maps
Cotton - CH - 17 CIR251 Marker 53.3 (cM) Automated name-based View Maps
Cotton - T3 - 17 CIR251 Marker 55.94 (cM) Automated name-based View Maps
Cotton - GVc - 17 CIR251 Marker 38.6 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CIR251 Marker 59.4 (cM) Automated name-based View Maps
CIR261 Marker Cotton 1,187,407 - 1,187,904 Cotton - GVc - 17 CIR261 Marker 63.9 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CIR261 Marker 85.4 (cM) Automated name-based View Maps
CIR347 Marker Cotton 42,298,424 - 42,298,687 Cotton - GVc - 17 CIR347 Marker 5.5 (cM) Automated name-based View Maps
Cotton - T3 - 17 CIR347 Marker 13.88 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CIR347 Marker 4 (cM) Automated name-based View Maps
Cotton - T3 - 3 CIR347 Marker 95.5 (cM) Automated name-based View Maps
CIR375 Marker Cotton 5,895,098 - 5,895,531 Cotton - GVc - 17 CIR375 Marker 39.1 (cM) Automated name-based View Maps
Cotton - Guazuncho2xVH8-BC1 - c17 CIR375 Marker 58.3 (cM) Automated name-based View Maps
Cotton - E3 - 17 CIR375 Marker 91.6 (cM) Automated name-based View Maps
Cotton - CH - 17 CIR375 Marker 89.6 (cM) Automated name-based View Maps
CLU1074 Marker Cotton 6,483,694 - 6,484,567 No other positions
CLU1324 Marker Cotton 42,318,929 - 42,319,744 No other positions